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Luna, Fábia de Oliveira; Bonde, Robert K.; Attademo, Fernanda L. N.; Saunders, Jonathan W.; Meigs-Friend, Gaia; Passavante, José Zanon O.; Hunter, Margaret E.
(detail)
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2012 |
Phylogeographic implications for release of critically endangered manatee calves rescued in northeast Brazil.
Aquatic Conserv.: Mar. Freshw. Ecosyst. 22(5): 665–672. 2 tabs. 1 fig. DOI: 10.1002/aqc.2260 Publ. online July 4, 2012 in wileyonlinelibrary.com.
–ABSTRACT: 1. The Antillean manatee (Trichechus manatus manatus), a subspecies of the West Indian manatee, is a large-bodied marine mammal found in fresh, brackish, and marine habitats throughout the Caribbean Islands and Central and South America. Antillean manatees in Brazil are classified as critically endangered, with a census size of approximately 500 individuals. The population in the Northeast region of Brazil is suspected to have approximately 300 manatees and is threatened by habitat alteration and incidental entanglement in fishing gear.
2. A high incidence of dependent calf strandings have been identified near areas of altered critical manatee habitat. The majority of the calves are neonates, discovered alive, with no potential mothers nearby. These calves typically require human intervention to survive.
3. Since 1989 the calves have been rescued (N=67), rehabilitated, and released (N=25) to supplement the small wild manatee population. The rescued calves, and those born in captivity, are typically, not released to their rescue location, mainly for logistical reasons. Therefore, phylogeographic analyses can help to identify related populations and appropriate release sites.
4. Here, mitochondrial DNA analyses identified low haplotype (h=0.08) and nucleotide (p=0.0026) genetic diversity in three closely related haplotypes. All three haplotypes (M01, M03, and a previously unidentified haplotype, M04) were found in the northern portion of the region, while only a single haplotype (M01) was represented in the south. This suggests the presence of two genetic groups with a central mixing zone. Release of rehabilitated calves to unrelated populations may result in genetic swamping of locally adapted alleles or genotypes, limiting the evolutionary potential of the population.
5. The small population size coupled with low genetic diversity indicates that the Northeast Brazil manatee population is susceptible to inbreeding depression and possible local extinction. Further conservation measures incorporating genetic information could be beneficial to the critically endangered Brazilian manatee population.
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Hunter, Margaret E.; Meigs-Friend, Gaia; Ferrante, Jason A.; Takoukam Kamla, Aristide; Dorazio, Robert M.; Keith Diagne, Lucy; Luna, Fabia; Lanyon, Janet M.; Reid, James P.
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2018 |
Surveys of environmental DNA (eDNA): a new approach to estimate occurrence in Vulnerable manatee populations.
Endangered Species Research 35: 101-111. doi:10.3354/esr00880. Mar. 13, 2018.
–ABSTRACT: Environmental DNA (eDNA) detection is a technique used to non-invasively detect cryptic, low density, or logistically difficult-to-study species, such as imperiled manatees. For eDNA measurement, genetic material shed into the environment is concentrated from water samples and analyzed for the presence of target species. Cytochrome b quantitative PCR and droplet digital PCR eDNA assays were developed for the 3 Vulnerable manatee species: African, Amazonian, and both subspecies of the West Indian (Florida and Antillean) manatee. Environmental DNA assays can help to delineate manatee habitat ranges, high use areas, and seasonal population changes. To validate the assay, water was analyzed from Florida's east coast containing a high-density manatee population and produced 31564 DNA molecules l-1 on average and high occurrence (?) and detection (p) estimates (? = 0.84 [0.40-0.99]; p = 0.99 [0.95-1.00]; limit of detection 3 copies µl-1). Similar occupancy estimates were produced in the Florida Panhandle (? = 0.79 [0.54-0.97]) and Cuba (? = 0.89 [0.54-1.00]), while occupancy estimates in Cameroon were lower (? = 0.49 [0.09-0.95]). The eDNA-derived detection estimates were higher than those generated using aerial survey data on the west coast of Florida and may be effective for population monitoring. Subsequent eDNA studies could be particularly useful in locations where manatees are (1) difficult to identify visually (e.g. the Amazon River and Africa), (2) are present in patchy distributions or are on the verge of extinction (e.g. Jamaica, Haiti), and (3) where repatriation efforts are proposed (e.g. Brazil, Guadeloupe). Extension of these eDNA techniques could be applied to other imperiled marine mammal populations such as African and Asian dugongs.
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Bibliography and Index of the Sirenia and Desmostylia 